Pacific Symposium on Biocomputing
The Big Island of Hawaii
January 3-7, 2017
A few weeks ago, Vice President Joe Biden, in announcing his new research funding initiatives, criticized the current state of scientific research, which is “trapped in silos, preventing faster progress and greater reach to patients.” To make matters worse, the New England Journal of Medicine published a commentary calling scientists who repurpose data “research parasites” who may use data generated by others to demonstrate alternative hypotheses. We, the organizers of this session, believe this is absolutely unacceptable and that the concept of data hoarding not only runs contrary to the spirit of, but also actively damages scientific research. Scientific research is meant to seek objective truth, rather than promote a personal agenda, and we believe the only way to do so is through transparency and reproducibility.
Relevant challenges include:
In this PSB 2017 session, we invite manuscripts that explore and propose solutions to the many challenges of reproducibility in the era of precision medicine. Manuscripts might describe:
All submissions will be required to be fully or nearly fully reproducible and freely available on a repository such as Github, Bitbucket, or Figshare.
Konrad J. Karczewski
Massachusetts General Hospital, Broad Institute
konradk (at) broadinstitute.org
Nicholas P. Tatonetti
nick.tatonetti (at) columbia.edu
Chirag J. Patel
Harvard Medical School
chirag_patel (at) hms.harvard.edu
Arjun K. Manrai
Harvard Medical School
manrai (at) post.harvard.edu
C. Titus Brown
University of California, Davis
ctbrown (at) ucdavis.edu
John P.A. Ioannidis
jioannid (at) stanford.edu
Paper Submission Deadline:
August 1 August 7, 2016
Notification of Acceptances: September 12, 2016
Revised Papers Due: October 3, 2016
Poster/Abstract Submission Deadline: November 14, 2016
PSB 2017: January 3-7, 2017
Papers must be submitted to the PSB paper management system
The accepted file formats are: postscript (*.ps) and Adobe Acrobat (*.pdf). Attached files should be named with the last name of the first author (e.g. altman.ps or altman.pdf). Hardcopy submissions or unprocessed TEX or LATEX files or electronic submissions not submitted through the paper management system will be rejected without review.
Each paper must be accompanied by a cover letter. The cover letter should be the first page of your paper submission. The cover letter must state the following:
Submitted papers are limited to twelve (12) pages (not including the cover letter) in our publication format. Please format your paper according to the instructions. If figures can not be easily resized and placed precisely in the text, then it should be clear that with appropriate modifications, the total manuscript length would be within the page limit.